hello everyone i have a problem with pisces when i activate agrif to run pisces with nested child grid, i face this error.
Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
Backtrace for this error:
Program received signal SIGBUS: Access to an undefined portion of a memory object.
Backtrace for this error:
Program received signal SIGSEGV: Segmentation fault - invalid memory reference.
Backtrace for this error:
Program received signal SIGBUS: Access to an undefined portion of a memory object.
Backtrace for this error:
Program received signal SIGBUS: Access to an undefined portion of a memory object.
Backtrace for this error:
#0 0x7c3921823960 in ???
#1 0x7c3921822ac5 in ???
#2 0x7c392144251f in ???
at ./signal/…/sysdeps/unix/sysv/linux/x86_64/libc_sigaction.c:0
#3 0x7c391c03bac0 in ???
#4 0x7c391c03d47e in ???
#5 0x7c39213434ec in ???
#6 0x7c3921ba2df5 in ???
#7 0x6227bbf45bd4 in ???
#8 0x6227bbf488f3 in ???
#9 0x6227bbea6084 in ???
#10 0x6227bbea68aa in ???
#11 0x6227bbea69a7 in ???
#12 0x6227bbe7d3ff in ???
#13 0x6227bbda0bbe in ???
#14 0x7c3921429d8f in __libc_start_call_main
at …/sysdeps/nptl/libc_start_call_main.h:58
#15 0x7c3921429e3f in __libc_start_main_impl
at …/csu/libc-start.c:392
#16 0x6227bbda0be4 in ???
#17 0xffffffffffffffff in ???
#0 0x73aa79c23960 in ???
#1 0x73aa79c22ac5 in ???
#2 0x73aa7984251f in ???
at ./signal/…/sysdeps/unix/sysv/linux/x86_64/libc_sigaction.c:0
#3 0x73aa74298aa0 in ???
#4 0x73aa7429a47e in ???
#5 0x73aa797434ec in ???
#6 0x73aa79f81df5 in ???
#7 0x64d2cdec1bd4 in ???
#8 0x64d2cdec48f3 in ???
#9 0x64d2cde22084 in ???
#10 0x64d2cde228aa in ???
#11 0x64d2cde229a7 in ???
#12 0x64d2cddf93ff in ???
#13 0x64d2cdd1cbbe in ???
#14 0x73aa79829d8f in __libc_start_call_main
at …/sysdeps/nptl/libc_start_call_main.h:58
#15 0x73aa79829e3f in __libc_start_main_impl
at …/csu/libc-start.c:392
#16 0x64d2cdd1cbe4 in ???
#17 0xffffffffffffffff in ???
#0 0x7529d4023960 in ???
#1 0x7529d4022ac5 in ???
#2 0x7529d3c4251f in ???
at ./signal/…/sysdeps/unix/sysv/linux/x86_64/libc_sigaction.c:0
#3 0x7529cd9daaa0 in ???
#4 0x7529cd9dc47e in ???
#5 0x7529d3b434ec in ???
#6 0x7529d3f01df5 in ???
#7 0x601e221d6bd4 in ???
#8 0x601e221d98f3 in ???
#9 0x601e22137084 in ???
#10 0x601e221378aa in ???
#11 0x601e221379a7 in ???
#12 0x601e2210e3ff in ???
#13 0x601e22031bbe in ???
#14 0x7529d3c29d8f in __libc_start_call_main
at …/sysdeps/nptl/libc_start_call_main.h:58
#15 0x7529d3c29e3f in __libc_start_main_impl
at …/csu/libc-start.c:392
#16 0x601e22031be4 in ???
#17 0xffffffffffffffff in ???
#0 0x7b1ff9a23960 in ???
#1 0x7b1ff9a22ac5 in ???
#0 0x7a472b423960 in ???
#1 0x7a472b422ac5 in ???
#2 0x7a472b04251f in ???
at ./signal/…/sysdeps/unix/sysv/linux/x86_64/libc_sigaction.c:0
#3 0x7a4724ecbaa0 in ???
#4 0x7a4724ecd47e in ???
#5 0x7a472af434ec in ???
#6 0x7a472b3e8df5 in ???
#7 0x5767f8432bd4 in ???
#8 0x5767f84358f3 in ???
#9 0x5767f8393084 in ???
#10 0x5767f83938aa in ???
#11 0x5767f83939a7 in ???
#12 0x5767f836a3ff in ???
#13 0x5767f828dbbe in ???
#2 0x7b1ff964251f in ???
at ./signal/…/sysdeps/unix/sysv/linux/x86_64/libc_sigaction.c:0
#3 0x7b1ff400c446 in ???
#4 0x7b1ff400f1cf in ???
#5 0x7b1ff41d8ae4 in ???
#6 0x7b1ff41d8f90 in ???
#7 0x7b1ff9176713 in ???
#8 0x7b1ff4015784 in ???
#9 0x7b1ff954f002 in ???
#10 0x7b1ff9904028 in ???
#11 0x5dde9f196c13 in ???
#12 0x5dde9f1998f3 in ???
#13 0x5dde9f0f7084 in ???
#14 0x5dde9f0f78aa in ???
#15 0x5dde9f0f79a7 in ???
#16 0x5dde9f0ce3ff in ???
#17 0x5dde9eff1bbe in ???
#14 0x7a472b029d8f in __libc_start_call_main
at …/sysdeps/nptl/libc_start_call_main.h:58
#15 0x7a472b029e3f in __libc_start_main_impl
at …/csu/libc-start.c:392
#16 0x5767f828dbe4 in ???
#17 0xffffffffffffffff in ???
#18 0x7b1ff9629d8f in __libc_start_call_main
at …/sysdeps/nptl/libc_start_call_main.h:58
#19 0x7b1ff9629e3f in __libc_start_main_impl
at …/csu/libc-start.c:392
#20 0x5dde9eff1be4 in ???
#21 0xffffffffffffffff in ???
Primary job terminated normally, but 1 process returned
a non-zero exit code. Per user-direction, the job has been aborted.
mpirun noticed that process rank 13 with PID 0 on node nyemb-System-Product-Name exited on signal 11 (Segmentation fault).
2025年 12月 30日 星期二 19:40:53 CST
Test croco_Y1.out
Warning: month not finished properly
unit : mg/m3
tracer nb : 22
short name : DCHL
long name : Diatoms chlorophyl Concentration
unit : mg/m3
tracer nb : 23
short name : NO3
long name : Nitrates Concentration
unit : mmol/m3
tracer nb : 24
short name : NH4
long name : Ammonium Concentration
unit : mmol/m3
Spherical grid detected.
Month Y1 did not work
if anyone has face the same error. the version i used is croco 2.1.0. every would be appreciated
croco_Y1.txt (31.8 KB)
i will also like to have an answer about river position. if all my rivers are inside the child grid, how to set the model to not considerate those in mother grid and only those in the child grid? thanks