Hello everybody!
I think I have the same error. I'm using a macOS Mojave (10.14.16). I downloaded the last version of CROCO and using:
• a C compiler —> g++7
• a Fortran compiler —> gfortran7
• a Netcdf library netcdf-c-4.7.3 and netcdf-fortran-4.5.2
• MPI libraries and compilers if running in parallel —> OpenMPI
When I run jobcomp, first export:
export NETCDFLIB="-L/usr/local/netcdf-f/lib -lnetcdff -L/usr/local/netcdf-c/lib -lnetcdf -lnetcdf -lm"
export NETCDFINC="-I/usr/local/netcdf-f/include"
export NF_CONFIG=/usr/local/netcdf-f/bin/nf-config
Then:
./jobcomp
but I obtained the next error:
OPERATING SYSTEM IS: Darwin
./jobcomp: line 60: nf-config: command not found
./jobcomp: line 61: nf-config: command not found
file namelist_pisces exists in Run directory
Checking COMPILEAGRIF...
Checking COMPILEMPI...
Checking COMPILEXIOS...
Checking COMPILEOASIS...
Checking COMPILEOMP...
cpp -traditional -DLinux -P -I -ICROCOFILES/AGRIF_INC mpc.F > mpc_.f
....
and continued the compilation with some warnings, and finally:
Undefined symbols for architecture x86_64:
"_nf_close_", referenced from:
_closecdf_ in closecdf.o
_wrt_his_ in wrt_his.o
_wrt_rst_ in wrt_rst.o
_get_initial_ in get_initial.o
"_nf_create_", referenced from:
_def_his_ in def_his.o
_def_rst_ in def_rst.o
"_nf_def_dim_", referenced from:
_def_his_ in def_his.o
_def_rst_ in def_rst.o
"_nf_def_var_", referenced from:
_def_grid_3d_ in def_grid_3d.o
_def_his_ in def_his.o
_def_rst_ in def_rst.o
"_nf_enddef_", referenced from:
_def_his_ in def_his.o
_def_rst_ in def_rst.o
"_nf_get_att_double_", referenced from:
_set_cycle_ in set_cycle.o
"_nf_get_att_text_", referenced from:
_get_initial_ in get_initial.o
"_nf_get_var1_double_", referenced from:
_set_cycle_ in set_cycle.o
_get_initial_ in get_initial.o
_get_stflux_ in get_stflux.o
_get_srflux_ in get_srflux.o
"_nf_get_vara_double_", referenced from:
_nf_fread_ in nf_fread.o
_nf_fread_x_ in nf_fread_x.o
_nf_fread_y_ in nf_fread_y.o
_nf_read_bry_ns_ in nf_read_bry.o
_nf_read_bry_ew_ in nf_read_bry.o
"_nf_get_vara_int_", referenced from:
_get_initial_ in get_initial.o
"_nf_inq_", referenced from:
_checkdims_ in checkdims.o
"_nf_inq_attname_", referenced from:
_set_cycle_ in set_cycle.o
"_nf_inq_dim_", referenced from:
_checkdims_ in checkdims.o
_set_cycle_ in set_cycle.o
"_nf_inq_var_", referenced from:
_set_cycle_ in set_cycle.o
"_nf_inq_varid_", referenced from:
_def_his_ in def_his.o
_def_rst_ in def_rst.o
_wrt_grid_ in wrt_grid.o
_get_initial_ in get_initial.o
_get_stflux_ in get_stflux.o
_get_srflux_ in get_srflux.o
"_nf_inq_varndims_", referenced from:
_get_stflux_ in get_stflux.o
_get_srflux_ in get_srflux.o
"_nf_open_", referenced from:
_def_his_ in def_his.o
_def_rst_ in def_rst.o
_get_initial_ in get_initial.o
_get_stflux_ in get_stflux.o
_get_srflux_ in get_srflux.o
"_nf_put_att_double_", referenced from:
_put_global_atts_ in put_global_atts.o
_def_grid_3d_ in def_grid_3d.o
"_nf_put_att_int_", referenced from:
_put_global_atts_ in put_global_atts.o
"_nf_put_att_text_", referenced from:
_put_global_atts_ in put_global_atts.o
_nf_add_attribute_ in nf_add_attribute.o
_def_grid_3d_ in def_grid_3d.o
_def_his_ in def_his.o
_def_rst_ in def_rst.o
"_nf_put_var1_double_", referenced from:
_wrt_grid_ in wrt_grid.o
_wrt_his_ in wrt_his.o
_wrt_rst_ in wrt_rst.o
"_nf_put_var1_text_", referenced from:
_wrt_grid_ in wrt_grid.o
"_nf_put_var_double_", referenced from:
_wrt_grid_ in wrt_grid.o
"_nf_put_vara_double_", referenced from:
_nf_fwrite_ in nf_fread.o
_nf_fwrite_x_ in nf_fread_x.o
_nf_fwrite_y_ in nf_fread_y.o
"_nf_put_vara_int_", referenced from:
_wrt_his_ in wrt_his.o
_wrt_rst_ in wrt_rst.o
"_nf_set_fill_", referenced from:
_def_his_ in def_his.o
"_nf_strerror_", referenced from:
_nf_read_bry_ns_ in nf_read_bry.o
_nf_read_bry_ew_ in nf_read_bry.o
"_nf_sync_ ... (more)
