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bioebus benguela

asked 2019-03-21 13:41:27 +0100

Hi everyone.

I'm try to run benguela case with biogechemstry BioEBUS with croco everything work fine for initial condition (make_grid, make_forcing, make_clim and make_ini) and also to make_clim_bioebus but when I try to do make_ini_bioebus there is a error screen:

In make_ini_bioebus (line 27) mkdir: cannot create directory ‘/disk_4_5t/matiasp/PROPIO_CROCO/CONFIGS/ANIDADO1/CROCO_FILES/’: File exists

Adding BIOEBUS data in file : /disk_4_5t/matiasp/PROPIO_CROCO/CONFIGS/ANIDADO1/CROCO_FILES/croco_ini.nc

Interpolations / extrapolations

Nitrate ...

Ext tracers: ro = 0 km - default value = NaN ext_tracers_ini: time index: 1 of total: 12 ext_tracers_ini: horizontal interpolation of seasonal data ext_tracers_ini: vertical interpolation

Oxygen ...

Ext tracers: ro = 0 km - default value = NaN ext_tracers_ini: time index: 1 of total: 12 ext_tracers_ini: horizontal interpolation of seasonal data ext_tracers_ini: vertical interpolation

CHla... Add_ini_chla: creating variable and attribute time index: 1 of total: 1 temporal interpolation Initialisation time: 0 - Time 1: -45 - Time 2: 45 Add_ini_chla: horizontal extrapolation of surface data Add_ini_chla: vertical extrapolation of chlorophyll

SPhyto and LPhyto... Add_ini_Sphyto_Lphyto: creating variable and attribute time index: 1 of total: 1

SZoo and LZoo... Add_ini_Szoo_Lzoo: creating variable and attribute time index: 1 of total: 1

Make a few plots... Index exceeds matrix dimensions.

Error in test_clim (line 78) field=squeeze(var(:,j,:));

Error in make_ini_bioebus (line 108) test_clim(ininame,grdname,'O2',1,coastfileplot)

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answered 2019-04-04 19:34:29 +0100

it seems to be just a plotting error at the end of the routine, but the file is probably done ... Patrick

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answered 2019-04-04 14:36:06 +0100

GildasC gravatar image

Hi Matias,

Could be a bug ... Can you explain a bit more what you want to do ? Saludos en Concépcion

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Asked: 2019-03-21 13:41:27 +0100

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Last updated: Apr 04