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Hi,
An option is to create the FRC file by hand, and then fill the values of the variables with data you have. For example, here I just adapted the file create_forcing.m. You would need to create the file, and then open it again and fill the values. For this see the tutorial in this link
http://modb.oce.ulg.ac.be/mediawiki/index.php/Octcdf
I've attached the adaptation